Resources


Resources for miRNA-target data

Source Stype Release Link
NCBI Homo sapiens RNA sequences NCBI Annotation Release 108, Assembly GRCh38.p7
miRBase miRNA sequences Release 21
TargetScan predicted miRNA Targets Release 7.1
miRDB predicted miRNA Targets Release 5.0
miRTarBase validated miRNA Targets Release 6.0
TarPmiR prediction tool Release 02/15/2017
KEGG Pathways GSEA Genesets 12/12/2016
Reactome Pathways GSEA Genesets 02/02/2017
NCBI Mus musculus RNA sequences NCBI Annotation Release 106, Assembly GRCm38.p4
NCBI Rattus norvegicus RNA sequences NCBI Annotation Release 106, Assembly Rnor_6.0
NCBI Canis familiaris RNA sequences NCBI Annotation Release 105, Assembly CanFam3.1
NCBI Bos taurus RNA sequences NCBI Annotation Release 105, Assembly Bt_UMD_3.1

Statistics

Species miRNA Genes Transcripts Interactions Validated Entries
human 2588 20204 41695 30413061 254144
rat 765 23426 21796 1913648 76
mouse 1915 21990 32605 3812972 7898
dog 453 19848 16484 1415884 0
cow 793 21435 17031 1453576 29

Download miRNA to gene interactions data

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